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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC054953.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 260aa MW: 28843.6 Da PI: 8.3045 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105.9 | 2.2e-33 | 46 | 100 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt++LH+rFveav+qLGG++kAtPk+il++m+++gLtl+h+kSHLQkYRl EcC054953.30 46 KPRLKWTTDLHKRFVEAVNQLGGADKATPKSILKAMGIPGLTLYHLKSHLQKYRL 100 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.436 | 43 | 103 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.8E-31 | 44 | 101 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.15E-17 | 45 | 101 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.7E-24 | 46 | 101 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 5.2E-10 | 48 | 99 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 8.8E-21 | 143 | 189 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005975 | Biological Process | carbohydrate metabolic process | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MHNHSLYGGK NFHPSSRMSI LSERHLLLQA ANGPGDSGLI LSTDAKPRLK WTTDLHKRFV 60 EAVNQLGGAD KATPKSILKA MGIPGLTLYH LKSHLQKYRL SKNLHGQATN GTNRAVAEVK 120 VSEANGPHLN NSSIGIQVNK NLHISEAFQV QIEVQRRLHE QMEAQRHMQL HIEAQGKYLQ 180 AVLEKAQETL GRHDSGSVGL EAAKYQLSEL VSKVSADSLS STFPDVVDIH LHQMQMNQNT 240 DGSLDSCLTC ERPQKDREED |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010054431.1 | 0.0 | PREDICTED: myb family transcription factor APL isoform X2 | ||||
Swissprot | Q9SAK5 | 6e-52 | APL_ARATH; Myb family transcription factor APL | ||||
TrEMBL | A0A059DGG5 | 0.0 | A0A059DGG5_EUCGR; Uncharacterized protein | ||||
STRING | GLYMA13G39290.2 | 1e-118 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04030.3 | 1e-108 | G2-like family protein |